RDKit
Open-source cheminformatics and machine learning.
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RDKit::FilterCatalogEntry Class Reference

#include <FilterCatalogEntry.h>

Inheritance diagram for RDKit::FilterCatalogEntry:
RDCatalog::CatalogEntry

Public Member Functions

 FilterCatalogEntry ()
 
 FilterCatalogEntry (const std::string &name, const FilterMatcherBase &matcher)
 
 FilterCatalogEntry (const std::string &name, boost::shared_ptr< FilterMatcherBase > matcher)
 
 FilterCatalogEntry (const FilterCatalogEntry &rhs)
 
 ~FilterCatalogEntry () override
 
bool isValid () const
 Returns true if the Filters stored in this catalog entry are valid.
 
std::string getDescription () const override
 Returns the description of the catalog entry.
 
void setDescription (const std::string &description)
 Sets the description of the catalog entry.
 
Properties
STR_VECT getPropList () const
 returns a list with the names of our properties
 
template<typename T >
void setProp (const char *key, T val)
 sets a property value
 
template<typename T >
void setProp (const std::string &key, T val)
 This is an overloaded member function, provided for convenience. It differs from the above function only in what argument(s) it accepts.
 
template<typename T >
void getProp (const char *key, T &res) const
 allows retrieval of a particular property value
 
template<typename T >
void getProp (const std::string &key, T &res) const
 This is an overloaded member function, provided for convenience. It differs from the above function only in what argument(s) it accepts.
 
template<typename T >
getProp (const char *key) const
 This is an overloaded member function, provided for convenience. It differs from the above function only in what argument(s) it accepts.
 
template<typename T >
getProp (const std::string &key) const
 This is an overloaded member function, provided for convenience. It differs from the above function only in what argument(s) it accepts.
 
template<typename T >
bool getPropIfPresent (const char *key, T &res) const
 
template<typename T >
bool getPropIfPresent (const std::string &key, T &res) const
 This is an overloaded member function, provided for convenience. It differs from the above function only in what argument(s) it accepts.
 
bool hasProp (const char *key) const
 returns whether or not we have a property with name key
 
bool hasProp (const std::string &key) const
 This is an overloaded member function, provided for convenience. It differs from the above function only in what argument(s) it accepts.
 
void clearProp (const char *key)
 clears the value of a property
 
void clearProp (const std::string &key)
 This is an overloaded member function, provided for convenience. It differs from the above function only in what argument(s) it accepts.
 
DictgetProps ()
 
const DictgetProps () const
 
void setProps (const Dict &props)
 
bool getFilterMatches (const ROMol &mol, std::vector< FilterMatch > &matchVect) const
 Returns the matching filters for this catalog entry.
 
bool hasFilterMatch (const ROMol &mol) const
 Returns true if the filters in this catalog entry match the molecule.
 
void toStream (std::ostream &ss) const override
 serializes (pickles) to a stream
 
std::string Serialize () const override
 returns a string with a serialized (pickled) representation
 
void initFromStream (std::istream &ss) override
 initializes from a stream pickle
 
void initFromString (const std::string &text) override
 initializes from a string pickle
 
- Public Member Functions inherited from RDCatalog::CatalogEntry
virtual ~CatalogEntry ()=0
 
void setBitId (int bid)
 sets our bit Id
 
int getBitId () const
 returns our bit Id
 

Detailed Description

Definition at line 56 of file FilterCatalogEntry.h.

Constructor & Destructor Documentation

◆ FilterCatalogEntry() [1/4]

RDKit::FilterCatalogEntry::FilterCatalogEntry ( )
inline

Definition at line 63 of file FilterCatalogEntry.h.

◆ FilterCatalogEntry() [2/4]

RDKit::FilterCatalogEntry::FilterCatalogEntry ( const std::string &  name,
const FilterMatcherBase matcher 
)
inline

Definition at line 65 of file FilterCatalogEntry.h.

◆ FilterCatalogEntry() [3/4]

RDKit::FilterCatalogEntry::FilterCatalogEntry ( const std::string &  name,
boost::shared_ptr< FilterMatcherBase matcher 
)
inline

Definition at line 70 of file FilterCatalogEntry.h.

◆ FilterCatalogEntry() [4/4]

RDKit::FilterCatalogEntry::FilterCatalogEntry ( const FilterCatalogEntry rhs)
inline

Definition at line 76 of file FilterCatalogEntry.h.

◆ ~FilterCatalogEntry()

RDKit::FilterCatalogEntry::~FilterCatalogEntry ( )
inlineoverride

Definition at line 81 of file FilterCatalogEntry.h.

Member Function Documentation

◆ clearProp() [1/2]

void RDKit::FilterCatalogEntry::clearProp ( const char key)
inline

clears the value of a property

Definition at line 180 of file FilterCatalogEntry.h.

◆ clearProp() [2/2]

void RDKit::FilterCatalogEntry::clearProp ( const std::string &  key)
inline

This is an overloaded member function, provided for convenience. It differs from the above function only in what argument(s) it accepts.

Definition at line 185 of file FilterCatalogEntry.h.

References RDKit::Dict::clearVal().

◆ getDescription()

std::string RDKit::FilterCatalogEntry::getDescription ( ) const
overridevirtual

Returns the description of the catalog entry.

Implements RDCatalog::CatalogEntry.

◆ getFilterMatches()

bool RDKit::FilterCatalogEntry::getFilterMatches ( const ROMol mol,
std::vector< FilterMatch > &  matchVect 
) const
inline

Returns the matching filters for this catalog entry.

Definition at line 201 of file FilterCatalogEntry.h.

◆ getProp() [1/4]

template<typename T >
T RDKit::FilterCatalogEntry::getProp ( const char key) const
inline

This is an overloaded member function, provided for convenience. It differs from the above function only in what argument(s) it accepts.

Definition at line 150 of file FilterCatalogEntry.h.

References RDKit::Dict::getVal().

◆ getProp() [2/4]

template<typename T >
void RDKit::FilterCatalogEntry::getProp ( const char key,
T &  res 
) const
inline

allows retrieval of a particular property value

Parameters
keythe name under which the property should be stored. If a property is already stored under this name, it will be replaced.
resa reference to the storage location for the value.

Notes:

  • if no property with name key exists, a KeyErrorException will be thrown.
  • the boost::lexical_cast machinery is used to attempt type conversions. If this fails, a boost::bad_lexical_cast exception will be thrown.

Definition at line 140 of file FilterCatalogEntry.h.

References RDKit::Dict::getVal().

◆ getProp() [3/4]

template<typename T >
T RDKit::FilterCatalogEntry::getProp ( const std::string &  key) const
inline

This is an overloaded member function, provided for convenience. It differs from the above function only in what argument(s) it accepts.

Definition at line 155 of file FilterCatalogEntry.h.

References RDKit::Dict::getVal().

◆ getProp() [4/4]

template<typename T >
void RDKit::FilterCatalogEntry::getProp ( const std::string &  key,
T &  res 
) const
inline

This is an overloaded member function, provided for convenience. It differs from the above function only in what argument(s) it accepts.

Definition at line 145 of file FilterCatalogEntry.h.

References RDKit::Dict::getVal().

◆ getPropIfPresent() [1/2]

template<typename T >
bool RDKit::FilterCatalogEntry::getPropIfPresent ( const char key,
T &  res 
) const
inline

returns whether or not we have a property with name key and assigns the value if we do

Definition at line 162 of file FilterCatalogEntry.h.

References RDKit::Dict::getValIfPresent().

◆ getPropIfPresent() [2/2]

template<typename T >
bool RDKit::FilterCatalogEntry::getPropIfPresent ( const std::string &  key,
T &  res 
) const
inline

This is an overloaded member function, provided for convenience. It differs from the above function only in what argument(s) it accepts.

Definition at line 167 of file FilterCatalogEntry.h.

References RDKit::Dict::getValIfPresent().

◆ getPropList()

STR_VECT RDKit::FilterCatalogEntry::getPropList ( ) const
inline

returns a list with the names of our properties

Definition at line 103 of file FilterCatalogEntry.h.

References RDKit::Dict::keys().

◆ getProps() [1/2]

Dict & RDKit::FilterCatalogEntry::getProps ( )
inline

Properties usually contain the reference and source for the catalog entry.

Definition at line 191 of file FilterCatalogEntry.h.

◆ getProps() [2/2]

const Dict & RDKit::FilterCatalogEntry::getProps ( ) const
inline

Definition at line 192 of file FilterCatalogEntry.h.

◆ hasFilterMatch()

bool RDKit::FilterCatalogEntry::hasFilterMatch ( const ROMol mol) const
inline

Returns true if the filters in this catalog entry match the molecule.

Definition at line 212 of file FilterCatalogEntry.h.

◆ hasProp() [1/2]

bool RDKit::FilterCatalogEntry::hasProp ( const char key) const
inline

returns whether or not we have a property with name key

Definition at line 172 of file FilterCatalogEntry.h.

References RDKit::Dict::hasVal().

◆ hasProp() [2/2]

bool RDKit::FilterCatalogEntry::hasProp ( const std::string &  key) const
inline

This is an overloaded member function, provided for convenience. It differs from the above function only in what argument(s) it accepts.

Definition at line 174 of file FilterCatalogEntry.h.

References RDKit::Dict::hasVal().

◆ initFromStream()

void RDKit::FilterCatalogEntry::initFromStream ( std::istream &  ss)
overridevirtual

initializes from a stream pickle

Implements RDCatalog::CatalogEntry.

◆ initFromString()

void RDKit::FilterCatalogEntry::initFromString ( const std::string &  text)
overridevirtual

initializes from a string pickle

Implements RDCatalog::CatalogEntry.

◆ isValid()

bool RDKit::FilterCatalogEntry::isValid ( ) const
inline

Returns true if the Filters stored in this catalog entry are valid.

Definition at line 86 of file FilterCatalogEntry.h.

◆ Serialize()

std::string RDKit::FilterCatalogEntry::Serialize ( ) const
overridevirtual

returns a string with a serialized (pickled) representation

Implements RDCatalog::CatalogEntry.

◆ setDescription()

void RDKit::FilterCatalogEntry::setDescription ( const std::string &  description)

Sets the description of the catalog entry.

◆ setProp() [1/2]

template<typename T >
void RDKit::FilterCatalogEntry::setProp ( const char key,
val 
)
inline

sets a property value

Parameters
keythe name under which the property should be stored. If a property is already stored under this name, it will be replaced.
valthe value to be stored

Definition at line 113 of file FilterCatalogEntry.h.

◆ setProp() [2/2]

template<typename T >
void RDKit::FilterCatalogEntry::setProp ( const std::string &  key,
val 
)
inline

This is an overloaded member function, provided for convenience. It differs from the above function only in what argument(s) it accepts.

Definition at line 119 of file FilterCatalogEntry.h.

References RDKit::Dict::setVal().

◆ setProps()

void RDKit::FilterCatalogEntry::setProps ( const Dict props)
inline

Definition at line 193 of file FilterCatalogEntry.h.

◆ toStream()

void RDKit::FilterCatalogEntry::toStream ( std::ostream &  ss) const
overridevirtual

serializes (pickles) to a stream

Implements RDCatalog::CatalogEntry.


The documentation for this class was generated from the following file: