RDKit
Open-source cheminformatics and machine learning.
Loading...
Searching...
No Matches
ForceField/UFF/Utils.h
Go to the documentation of this file.
1
//
2
// Copyright (C) 2013-2024 Paolo Tosco and other RDKit contributors
3
//
4
// @@ All Rights Reserved @@
5
// This file is part of the RDKit.
6
// The contents are covered by the terms of the BSD license
7
// which is included in the file license.txt, found at the root
8
// of the RDKit source tree.
9
//
10
#include <
RDGeneral/export.h
>
11
#ifndef RD_UFFUTILS_H
12
#define RD_UFFUTILS_H
13
#include <tuple>
14
#include <
Geometry/point.h
>
15
16
namespace
ForceFields
{
17
namespace
UFF {
18
namespace
Utils {
19
//! calculates and returns the cosine of the Y angle in an improper torsion
20
//! (see UFF paper, equation 19)
21
RDKIT_FORCEFIELD_EXPORT
double
calculateCosY
(
const
RDGeom::Point3D
&iPoint,
22
const
RDGeom::Point3D
&jPoint,
23
const
RDGeom::Point3D
&kPoint,
24
const
RDGeom::Point3D
&lPoint);
25
26
//! calculates and returns the UFF force constant for an improper torsion
27
/*!
28
29
\param at2AtomicNum atomic number for atom 2
30
\param isCBoundToO boolean flag; true if atom 2 is sp2 carbon bound to sp2
31
oxygen
32
33
\return the force constant
34
35
*/
36
RDKIT_FORCEFIELD_EXPORT
std::tuple<double, double, double, double>
37
calcInversionCoefficientsAndForceConstant
(
int
at2AtomicNum,
bool
isCBoundToO);
38
}
// namespace Utils
39
}
// namespace UFF
40
}
// namespace ForceFields
41
42
#endif
RDGeom::Point3D
Definition
point.h:54
export.h
RDKIT_FORCEFIELD_EXPORT
#define RDKIT_FORCEFIELD_EXPORT
Definition
export.h:185
ForceFields::UFF::Utils::calcInversionCoefficientsAndForceConstant
RDKIT_FORCEFIELD_EXPORT std::tuple< double, double, double, double > calcInversionCoefficientsAndForceConstant(int at2AtomicNum, bool isCBoundToO)
calculates and returns the UFF force constant for an improper torsion
ForceFields::UFF::Utils::calculateCosY
RDKIT_FORCEFIELD_EXPORT double calculateCosY(const RDGeom::Point3D &iPoint, const RDGeom::Point3D &jPoint, const RDGeom::Point3D &kPoint, const RDGeom::Point3D &lPoint)
ForceFields
Definition
TorsionAngleContribs.h:21
point.h
ForceField
UFF
Utils.h
Generated on Mon Sep 30 2024 05:19:34 for RDKit by
1.9.8